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CML Annotea example

From: Eric Neumann <ENeumann@BeyondGenomics.com>
Date: Fri, 2 Jan 2004 10:47:53 -0500
Message-ID: <FC5C355B8AE9F2499A5220CCEDC34756CF8773@bgmail.lifescience.com>
To: <public-semweb-lifesci@w3.org>


Happy New Year! 

I'm posting this nice use-case Marja-Riitta has done using the Annotea
web-annotation tool: http://www.w3.org/2003/12/cmlcase/cml.html

The generated RDF annotations can be found at:
http://www.w3.org/2003/12/cml.rdf 

This example looks into how researchers would use an RDF-based
annotation system to capture and aggregate relevant facts regarding
chronic myelogenous leukemia (CML) and its surrounding genomics (e.g.,
Omim, LocusLink , KEGG, BioCarta). The facts are specified in RDF as
Amaya bookmarks according to specific semantic themes using Dublin Core
(dc) tags. 

This document could easily be expanded with additional RDF defined
facts, including the incorporation of additional disease specific
ontologies if so desired. In practice, the RDF generated would
potentially become the basis of scientific exchange and collaboration
and a theme such as CML, whose content is very much machine readable. I
hope for us to use this example as the basis adding increasing richness
to this use-case topic, from a diverse set of sources.

I also hope the other examples a few of you offered will be posted here
as well soon...

Best,
Eric
Received on Friday, 2 January 2004 10:48:12 UTC

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