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Re: 2,4 billions triples of Bioinformatics RAW DATA NOW

From: Hugh Glaser <hg@ecs.soton.ac.uk>
Date: Wed, 22 Apr 2009 21:44:37 +0100
To: "francoisbelleau@yahoo.ca" <francoisbelleau@yahoo.ca>
CC: "public-lod@w3.org" <public-lod@w3.org>
Message-ID: <EMEW3|3b43233440032d722a444cefbe1181e1l3LLiq02hg|ecs.soton.ac.uk|AA72%hg@ecs.soton.ac.uk>
Thatıs really good.
Iıve loaded the owl:sameAs you publish that I didn't have already into our
general sameAs service (I hope I got them all).
For example:
http://www.rkbexplorer.com/sameAs/?uri=http://bio2rdf.org/dbpedia:3-Methylfe
ntanyl
To see in a browser, or (unix)
curl -H "Accept: application/rdf+xml"
"http://www.rkbexplorer.com/sameAs/?uri=http://bio2rdf.org/dbpedia:3-Methylf
entanyl"
To get the rdf sameAs list.
Hope that might help a little.
Best
Hugh

-- 
Hugh Glaser,  Reader
              Dependable Systems & Software Engineering
              School of Electronics and Computer Science,
              University of Southampton,
              Southampton SO17 1BJ
Work: +44 (0)23 8059 3670, Fax: +44 (0)23 8059 3045
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http://www.ecs.soton.ac.uk/people/hg




On 22/04/2009 05:49, "François Belleau" <francoisbelleau@yahoo.ca> wrote:

> 
>> In his recent talk at TED
>> <http://www.ted.com/index.php/talks/tim_berners_lee_on_the_next_web.html> ,
>> Tim Berner Lee invited the data provider to make available data in RDF format
>> to help the building process of linked data web.  He asked them to offer RAW
>> DATA NOW.
>> 
>>  
>> <http://4.bp.blogspot.com/_aXVrIcc4CUQ/Se6XDYaOf7I/AAAAAAAAAB0/J0wAMIjTt1o/s1
>> 600-h/tbl-at-ted.PNG>
>> 
>> We totally share this approach in the Bio2RDF community
>> <http://groups.google.ca/group/bio2rdf?hl=fr> , our goal is to make public
>> dataset of the bioinformatics domain available in RDF format via standard
>> SPARQL endpoints (Virtuoso server is used for that).  We strongly believe in
>> the semantic web approach to solve science problems but we do not want to
>> wait for data provider to do the RAW DATA conversion job.  Converting data to
>> RDF is not fun, we did a lot of this dirty job, and here are the results for
>> 34 datasets.
>> 
>> Our current datasets in N3 format are available here :
>> 
>> http://quebec.bio2rdf.org/download/n3/
>> 
>> We invite semantic search engine provider to index these files.
>> 
>> The way we produce them is documented in our Wiki at SourceForge in the
>> Cookbook section :
>> 
>> http://bio2rdf.wiki.sourceforge.net/Namespace%27s+update
>> 
>> The actual list of SPARQL endpoints in the linked data cloud is hosted here :
>> 
>> http://esw.w3.org/topic/TaskForces/CommunityProjects/LinkingOpenData/DataSets
>> /Statistics
>> 
>> Bio2RDF 2,4 billions triples graph of linked data represents 51 % of the
>> actual global linked data graph size.
>> 
>> Finally, this is what this highly connected knowledge world look like.
>> 
>>  
>> <http://2.bp.blogspot.com/_aXVrIcc4CUQ/Se6atlKfhPI/AAAAAAAAACE/9NTng82h73Y/s1
>> 600-h/Bio2RDF-map-0904.png>
>> 
>> I would take this occasion to thanks all the enthusiast biologist and
>> researcher who invest them self by annotating article, protein, gene product.
>> Without this essential work of connecting documents and concepts together,
>> this would project would not have been possible.
>> 
>> For the 20th anniversary of the web, I would also want to thanks Tim Berner
>> Lee for his inspiring vision.  Bio2RDF may not be the awaited killer app of
>> the life science to demonstrate the semantic web potential, but let's say
>> that it is only the beginning.
>> 
>> The WWW2009 workshop Linked Data on the Web (LDOW2009
>> <http://events.linkeddata.org/ldow2009/> ) was held today, I would like to
>> say how important the work of this community is.  Finally a last word to
>> congratulate Virtuoso team and especially Orri Erling for his fantastic work
>> with the new Virtuoso 6.0 server
>> <http://events.linkeddata.org/ldow2009/papers/ldow2009_paper3.pdf>  soon to
>> be released.  I cannot wait to see Bio2RDF data into this amazing engine
>> <http://lod.openlinksw.com/fct/facet.vsp> .
>> 
>> --
>> Posted By  bio2rdf  to  Bio2RDF atlas of post genomic knowledge
>> <http://bio2rdf.blogspot.com/2009/04/24-billions-triples-of-bioinformatics.ht
>> ml>   at  4/21/2009 11:50:00 PM
> 
>  
> 
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Received on Wednesday, 22 April 2009 20:45:29 UTC

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